Search results
Use the Citation link on the right side of the PMC view of this article to obtain the citation in the desired format. Check through this PubMed listing to locate citations/papers on individual NCBI services of your interest. For the BLAST® services, use these BLAST references. 2. Citing the NCBI internet site and individual web pages and records:
- Primer Designing Tool
Primer-blast tries to find target-specific primers by...
- PMC Free Article
We present a new software tool called Primer-BLAST to...
- Blast
The Basic Local Alignment Search Tool (BLAST) finds regions...
- Primer Designing Tool
Primer-blast tries to find target-specific primers by placing candidate primers on unique template regions that are not similar to other targets.
18 iun. 2012 · We present a new software tool called Primer-BLAST to alleviate the difficulty in designing target-specific primers. This tool combines BLAST with a global alignment algorithm to ensure a full primer-target alignment and is sensitive enough to detect targets that have a significant number of mismatches to primers.
Citing the NCBI BLAST algorithm. BLAST has evolved through dozens of publications over the years, culminating in the BLAST+ algorithm. While there are many important papers, if you’re using command-line BLAST or the NCBI website, it’s most important to cite current BLAST+ suite:
26 sept. 2016 · Publisher: National Center for Biotechnology Information (NCBI) Online: URL. Cite the source where the data was previously analysed. This includes the paper which publishes the data and the original location where you have found it.
Programs that use blast ¶ Ye J, Coulouris G, Zaretskaya I, Cutcutache I, Rozen S, Madden TL. (2012) “Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction.” BMC Bioinformatics 13:134. PubMed. Ye J, Ma N, Madden TL, Ostell JM. (2013) “IgBLAST: an immunoglobulin variable domain sequence analysis tool.”
28 nov. 2023 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.