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Programmatic access. UniProt provides several application programming interfaces (APIs) to query and access its data programmatically: UniProt website REST API. What: RESTful URLs that can be bookmarked, linked and used in programs for all entries, queries and tools available through this website.
18 iul. 2022 · Please click on the links below for documentation for the specific topics, including code examples: Retrieving individual entries. Retrieving entries via queries. UniProtKB query fields. UniProtKB return fields. UniProtKB return fields, specific article for cross-reference databases.
UniProt. Programmatic access - Retrieving entries via queries. You can use any query to define the set of entries that you are interested in. It is perhaps simplest to start with an interactive text search on the website to find the URL for your set, e.g., all reviewed human entries:
The Proteins REST API provides access to key biological data from UniProt and data from Large Scale Studies (LSS) mapped to UniProt. The services provide sequence feature annotations from UniProtKB, variation data from UniProtKB and mapped from LSS (1000 Genomes, ExAC, ClinVar, TCGA, COSMIC, TOPMed and gnomAD), proteomics & hpp data mapped from ...
UniProt is comprised of four components, each optimised for different uses: 1) The UniProt Knowledgebase (UniProtKB) is the central access point for extensive curated protein information, including function, classification, and cross-reference.
Ways to access UniProt programmatically. UniProt provides several application programming interfaces (APIs) to query and access its data programmatically (Click on the tabs below to see details).
7 nov. 2021 · UniProt is a great online resource for finding a wealth of information about proteins from nearly all model organisms. Searching it manually works well, but to get to the next level of protein data mining you'll likely need to access its data programmatically, via the hidden REST API.
