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Acum 22 ore · Using BLAST in the NCBI database, all sequences were identified as the CHD1 genes of several owl species belonging to the same family of POs, Strigidae, with different similarity percentages ...
Acum 5 zile · This gene, a Kirsten ras oncogene homolog from the mammalian ras gene family, encodes a protein that is a member of the small GTPase superfamily. A single amino acid substitution is responsible for an activating mutation.
Acum 5 zile · In the rare case a characterized protein is not found in UniParc, a protein BLAST search is conducted. The sequence of the highest BLAST result will be included for the characterized protein instead, provided that the sequence similarity–calculated as the ratio between the number of identical matches and the query protein length–is at least ...
Acum 22 ore · NCBI Basic Local Alignment Search Tool (BLAST): An online tool that searches the NCBI database for similar nucleotide or amino acid sequences to the search query. 14 The goal is for students to ensure that all assigned genes and isoforms were found by running the genes they retrieved from KEGG and NCBI through this tool. Students then tabulate ...
Acum 1 zi · Dihydroorotase (DHOase) is the third enzyme in the six enzymatic reaction steps of the endogenous pyrimidine nucleotide de novo biosynthesis pathway, which is a metabolic pathway conserved in both bacteria and eukaryotes. However, research on the biological function of DHOase in plant pathogenic fungi is very limited. In this study, we identified and named MoPyr4, a homologous protein of ...
Acum 4 zile · Kipferl and related zinc finger-associated domain-containing (ZAD) proteins were collected with NCBI BLAST searches using D. melanogaster Kipferl ZAD (regions 5–95) in the NCBI non-redundant protein or the UniProt reference proteomes databases (Altschul et al., 1997; Uniprot, 2021; Coordinators, 2018) applying significant E-value thresholds ...
Acum 1 zi · Additionally, UniProt offers a suite of tools, including a BLAST tool for conducting sequence similarity searches [27, 78], a Clustal Omega alignment tool for sequence alignment [27, 79], and the retrieve/ID mapping tool facilitating the retrieval of proteins using identifiers and mapping between UniProt and other external databases [27, 80].
